Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00055p00167390 | ATRABA5C, ARA4,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00148p00100780 | AtRABA5a,... | Ras-related protein RABA5a OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G05810 | ARA-1, ATRABA5E,... | RAB GTPase homolog A5E | 0.02 | OrthoFinder output from all 47 species | |
AT1G18200 | AtRABA6b, RABA6b | RAB GTPase homolog A6B | 0.03 | OrthoFinder output from all 47 species | |
AT1G73640 | RABA6a, AtRABA6a | RAB GTPase homolog A6A | 0.02 | OrthoFinder output from all 47 species | |
AT4G18430 | AtRABA1e, RABA1e | RAB GTPase homolog A1E | 0.03 | OrthoFinder output from all 47 species | |
Aop_g22189 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene59724.t1 | RABA2b,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g11161 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03218 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g47730.1 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Len_g02647 | RAB-A2C,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g28666 | AtRABA5d, RABA5d | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g16173 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g05911 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g27739 | No alias | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g27740 | No alias | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g006270.3.1 | AtRABA1f,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g42040 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e020213_P001 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |