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  5. Ehy_g05005

Ehy_g05005 (CHA19, CHR19, ETL1)


Aliases : CHA19, CHR19, ETL1

Description : ATPase component *(Etl1) & original description: none


Gene families : OG0005169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05005
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Als_g34031 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08541 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26219 No alias ATPase component *(Etl1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g014770.3.1 CHA19, CHR19,... chromatin remodeling factor (Etl1) 0.02 OrthoFinder output from all 47 species
Tin_g14259 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 621 733
IPR000330 SNF2_N 253 551
No external refs found!