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  5. Azfi_s0487.g073480

Azfi_s0487.g073480


Description : nMAT1/2 type-I mitochondrial RNA splicing factor & original description: CDS=1-2070


Gene families : OG0003627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0487.g073480
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Als_g01930 No alias nMAT1/2 type-I mitochondrial RNA splicing factor &... 0.03 OrthoFinder output from all 47 species
Als_g06394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011594_P001 Zm00001e011594 nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031023 microtubule organizing center organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR024937 Domain_X 466 559
IPR000477 RT_dom 159 255
No external refs found!