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  5. Solyc09g009370.3.1

Solyc09g009370.3.1 (Solyc09g009370.3)


Aliases : Solyc09g009370.3

Description : 35.1.19 not assigned.no ontology.C2 domain-containing protein calcium-dependent lipid-binding family protein


Gene families : OG_01_0000807 (Gene family) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g009370.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.27 Gene family
AT4G17140 No alias pleckstrin homology (PH) domain-containing protein 0.02 Gene family
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 Gene family
Cre12.g483500 No alias No description available 0.02 Gene family
Cre17.g728250 No alias No description available 0.02 Gene family
GSVIVT01013268001 No alias No description available 0.08 Gene family
GSVIVT01013270001 No alias No description available 0.08 Gene family
GSVIVT01017643001 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.14 Gene family
LOC_Os02g27110 Os02g0470400,... 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
LOC_Os02g27130 Os02g0470600 35.1.19 not assigned.no ontology.C2 domain-containing... 0.11 Gene family
MA_10426328g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.08 Gene family
MA_10428265g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.06 Gene family
MA_10432463g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.09 Gene family
MA_119498g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.13 Gene family
Smo440026 PACid_15401844 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
Smo444980 PACid_15420567 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
Zm00001d053260 GRMZM2G348014 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
Zm00001d053262 GRMZM2G057402 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR026854 VPS13_N 2 115
IPR009291 Vps62 2185 2323
IPR009291 Vps62 1947 2097
IPR031642 VPS13_mid_rpt 576 799
IPR031646 VPS13_N2 139 383
IPR031645 VPS13_C 3753 3895
IPR009543 SHR-BD 3296 3504
No external refs found!