Azfi_s0385.g067501

Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex & original description: CDS=741-2594

Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0385.g067501

Target	Alias	Description	ECC score	Gene Family Method
Als_g13746	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.04	OrthoFinder output from all 47 species
Ceric.22G050800.1	Ceric.22G050800	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Pir_g10398	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000387	spliceosomal snRNP assembly	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012990	Sec23_24_beta_S	254	357
IPR007123	Gelsolin-like_dom	485	572
IPR006900	Sec23/24_helical_dom	372	467
IPR006896	Sec23/24_trunk_dom	2	241

External Links

No external refs found!