Azfi_s0383.g067436

Description : assembly factor involved in RuBisCo assembly *(RAF2) & original description: CDS=145-864

Gene families : OG0002088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0383.g067436
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01920	No alias	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04878	No alias	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene54107.t1	Aspi01Gene54107	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.03	OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.86	No alias	RAF2 assembly factor involved in RuBisCo assembly	0.02	OrthoFinder output from all 47 species
Dac_g02570	No alias	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.04	OrthoFinder output from all 47 species
Dac_g11106	No alias	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g09993	No alias	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.03	OrthoFinder output from all 47 species
Sam_g06779	No alias	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.04	OrthoFinder output from all 47 species
Sam_g39199	No alias	assembly factor involved in RuBisCo assembly *(RAF2) &...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
BP	GO:0034311	diol metabolic process	None	Extended
BP	GO:0034312	diol biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042558	pteridine-containing compound metabolic process	None	Extended
BP	GO:0042559	pteridine-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046146	tetrahydrobiopterin metabolic process	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046173	polyol biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001533	Pterin_deHydtase	133	225

External Links

No external refs found!

Azfi_s0383.g067436

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation