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  5. Azfi_s0380.g067358

Azfi_s0380.g067358


Description : subfamily ABCG transporter & original description: CDS=43-3537


Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0380.g067358
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT2G37010 ATNAP12, NAP12 non-intrinsic ABC protein 12 0.06 OrthoFinder output from all 47 species
AT5G60740 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
Ceric.03G054000.1 Ceric.03G054000 subfamily ABCG transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g20978 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025230001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os10g30610.1 LOC_Os10g30610 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Lfl_g07524 ATNAP12, NAP12 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10426482g0010 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013183 No alias subfamily ABCG transporter & original description: CDS=554-3865 0.05 OrthoFinder output from all 47 species
Sam_g16195 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30136 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g008000.3.1 ATNAP12, NAP12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Spa_g12371 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34489 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004692_P001 Zm00001e004692 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e008651_P001 Zm00001e008651 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e037060_P003 Zm00001e037060 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040591_P002 Zm00001e040591 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 747 1160
IPR003439 ABC_transporter-like_ATP-bd 567 718
No external refs found!