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  5. Azfi_s0367.g066982

Azfi_s0367.g066982 (ATRAD21.3, SYN4)


Aliases : ATRAD21.3, SYN4

Description : mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex & original description: CDS=603-4571


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0367.g066982
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00174610 ATRAD21.3, SYN4,... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
AT5G16270 ATRAD21.3, SYN4 sister chromatid cohesion 1 protein 4 0.06 OrthoFinder output from all 47 species
Ala_g22608 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.05 OrthoFinder output from all 47 species
Als_g14846 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Cba_g03354 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Cba_g20812 ATRAD21.3, SYN4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.31G015800.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species
Ceric.39G042400.1 ATRAD21.3, SYN4,... not classified & original description: pacid=50582800... 0.07 OrthoFinder output from all 47 species
Dcu_g05845 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Ehy_g09953 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
LOC_Os01g67250.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.07 OrthoFinder output from all 47 species
Len_g49535 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
MA_673714g0010 ATRAD21.3, SYN4 Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013377 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species
Sam_g27905 No alias mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Solyc11g008740.2.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.06 OrthoFinder output from all 47 species
Zm00001e018959_P001 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.05 OrthoFinder output from all 47 species
Zm00001e028559_P002 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006910 Rad21_Rec8_N 1 100
No external refs found!