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  5. Azfi_s0350.g066551

Azfi_s0350.g066551 (PUM3, APUM3)


Aliases : PUM3, APUM3

Description : not classified & original description: CDS=36-2801


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0350.g066551
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Aev_g32967 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22893 PUM5, APUM5 Pumilio homolog 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g10325 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016242_P002 PUM1, APUM1,... Pumilio homolog 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 677 710
IPR001313 Pumilio_RNA-bd_rpt 787 817
IPR001313 Pumilio_RNA-bd_rpt 719 743
IPR001313 Pumilio_RNA-bd_rpt 868 897
IPR001313 Pumilio_RNA-bd_rpt 605 639
IPR001313 Pumilio_RNA-bd_rpt 822 855
IPR001313 Pumilio_RNA-bd_rpt 749 784
IPR001313 Pumilio_RNA-bd_rpt 641 674
IPR012940 NABP 283 599
No external refs found!