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Aliases : RPL16A
Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: CDS=236-670
Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0350.g066549 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00200160 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00203150 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | OrthoFinder output from all 47 species | |
| AT2G42740 | RPL16A | ribosomal protein large subunit 16A | 0.11 | OrthoFinder output from all 47 species | |
| AT3G58700 | No alias | Ribosomal L5P family protein | 0.15 | OrthoFinder output from all 47 species | |
| AT4G18730 | RPL16B | ribosomal protein L16B | 0.25 | OrthoFinder output from all 47 species | |
| AT5G45775 | No alias | Ribosomal L5P family protein | 0.26 | OrthoFinder output from all 47 species | |
| Adi_g004325 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g080914 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g080915 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g17681 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Ala_g30852 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g17101 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g21493 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g30844 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Aop_g70327 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene56794.t1 | RPL16A, Aspi01Gene56794 | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07180 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11185 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G112300.1 | RPL16A, Ceric.02G112300 | component *(uL5) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.39G033200.1 | RPL16A, Ceric.39G033200 | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020610.38 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Cre01.g027000 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.27 | OrthoFinder output from all 47 species | |
| Dac_g00272 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g15705 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32571 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08602 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Dcu_g27285 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g27669 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Dde_g25923 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020743001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.22 | OrthoFinder output from all 47 species | |
| GSVIVT01021244001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.23 | OrthoFinder output from all 47 species | |
| Gb_08546 | RPL16A | component RPL11 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Gb_22357 | RPL16A | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os01g10820.1 | RPL16A, LOC_Os01g10820 | component RPL11 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
| LOC_Os02g14059.1 | RPL16A, LOC_Os02g14059 | component RPL11 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g11710.1 | RPL16A, LOC_Os05g11710 | component RPL11 of LSU proteome component | 0.25 | OrthoFinder output from all 47 species | |
| LOC_Os06g35730.1 | RPL16A, LOC_Os06g35730 | component RPL11 of LSU proteome component | 0.25 | OrthoFinder output from all 47 species | |
| Lfl_g22000 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_74060g0010 | RPL16A | component RPL11 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| MA_86694g0010 | RPL16A | component RPL11 of LSU proteome component | 0.18 | OrthoFinder output from all 47 species | |
| Mp2g24740.1 | RPL16A | component RPL11 of LSU proteome component | 0.28 | OrthoFinder output from all 47 species | |
| Mp6g18870.1 | RPL16A | component RPL11 of LSU proteome component | 0.18 | OrthoFinder output from all 47 species | |
| Msp_g09123 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g34305 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00824 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c2_33280V3.1 | RPL16A, Pp3c2_33280 | ribosomal protein L16B | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c5_3870V3.1 | RPL16A, Pp3c5_3870 | Ribosomal L5P family protein | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c7_20160V3.1 | RPL16A, Pp3c7_20160 | ribosomal protein large subunit 16A | 0.16 | OrthoFinder output from all 47 species | |
| Ppi_g63573 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016923 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g17383 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.24 | OrthoFinder output from all 47 species | |
| Sam_g21398 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Smo444767 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Solyc02g086240.3.1 | RPL16A, Solyc02g086240 | component RPL11 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| Solyc07g055230.4.1 | RPL16A, Solyc07g055230 | component RPL11 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
| Solyc10g007980.3.1 | RPL16A, Solyc10g007980 | component RPL11 of LSU proteome component | 0.21 | OrthoFinder output from all 47 species | |
| Solyc12g010930.2.1 | RPL16A, Solyc12g010930 | component RPL11 of LSU proteome component | 0.26 | OrthoFinder output from all 47 species | |
| Spa_g07232 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g07233 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.23 | OrthoFinder output from all 47 species | |
| Spa_g22809 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.24 | OrthoFinder output from all 47 species | |
| Spa_g25528 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g30816 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g54041 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02344 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e024913_P001 | RPL16A, Zm00001e024913 | component RPL11 of LSU proteome component | 0.22 | OrthoFinder output from all 47 species | |
| Zm00001e026886_P003 | RPL16A, Zm00001e026886 | component RPL11 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| Zm00001e037255_P001 | RPL16A, Zm00001e037255 | component RPL11 of LSU proteome component | 0.22 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |