Description : component *(eL38) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-270
Gene families : OG0004541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004541_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0319.g064444 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G43460 | No alias | Ribosomal L38e protein family | 0.08 | OrthoFinder output from all 47 species | |
AT3G59540 | No alias | Ribosomal L38e protein family | 0.08 | OrthoFinder output from all 47 species | |
Ceric.07G049300.1 | Ceric.07G049300 | component *(eL38) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.28G050900.1 | Ceric.28G050900 | component *(eL38) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.35G022100.1 | Ceric.35G022100 | component *(eL38) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.35G022200.1 | Ceric.35G022200 | component *(eL38) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.35G022300.1 | Ceric.35G022300 | component *(eL38) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021719.6 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
Cre07.g325746 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | OrthoFinder output from all 47 species | |
Dac_g44338 | No alias | component *(eL38) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g06828 | No alias | component *(eL38) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01010854001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
GSVIVT01019051001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | OrthoFinder output from all 47 species | |
Gb_16529 | No alias | component RPL38 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Gb_29252 | No alias | component RPL38 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
MA_20588g0010 | No alias | component RPL38 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
Mp7g14520.1 | No alias | component RPL38 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
Pp3c10_20240V3.1 | Pp3c10_20240 | Ribosomal L38e protein family | 0.13 | OrthoFinder output from all 47 species | |
Pp3c12_17990V3.1 | Pp3c12_17990 | Ribosomal L38e protein family | 0.05 | OrthoFinder output from all 47 species | |
Pp3c4_11700V3.1 | Pp3c4_11700 | Ribosomal L38e protein family | 0.11 | OrthoFinder output from all 47 species | |
Sam_g20427 | No alias | component *(eL38) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Smo270247 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
Solyc05g055640.4.1 | Solyc05g055640 | component RPL38 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |