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  5. Azfi_s0312.g064202

Azfi_s0312.g064202


Description : regulatory protein of RNA homeostasis & original description: CDS=1-780


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0312.g064202
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00156070 ZFWD1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AT4G25440 ZFWD1 zinc finger WD40 repeat protein 1 0.03 OrthoFinder output from all 47 species
Dcu_g18917 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g12396 ZFWD1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06209 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016606_P001 ZFWD1, Zm00001e016606 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 126 161
IPR001680 WD40_repeat 90 122
No external refs found!