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  5. Azfi_s0292.g063381

Azfi_s0292.g063381


Description : meiotic crossover formation factor *(FANCD2) & original description: CDS=11-4657


Gene families : OG0007524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0292.g063381
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10714.t1 Aspi01Gene10714 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre10.g453650 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_40796 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_40797 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_40798 No alias meiotic crossover formation factor (FANCD2) 0.04 OrthoFinder output from all 47 species
Gb_40799 No alias meiotic crossover formation factor (FANCD2) 0.02 OrthoFinder output from all 47 species
Mp1g20410.1 No alias meiotic crossover formation factor (FANCD2) 0.04 OrthoFinder output from all 47 species
Nbi_g24209 No alias meiotic crossover formation factor *(FANCD2) & original... 0.07 OrthoFinder output from all 47 species
Solyc01g097110.2.1 Solyc01g097110 meiotic crossover formation factor (FANCD2) 0.03 OrthoFinder output from all 47 species
Tin_g10637 No alias meiotic crossover formation factor *(FANCD2) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e011509_P002 Zm00001e011509 meiotic crossover formation factor (FANCD2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR029448 FANCD2 2 403
IPR029448 FANCD2 439 738
IPR029448 FANCD2 1100 1331
No external refs found!