Azfi_s0288.g063259

Description : E3 ubiquitin ligase & original description: CDS=563-3001

Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0288.g063259
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00155p00026110	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cba_g67832	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g06527	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Mp4g07620.1	No alias	U-box domain-containing protein 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g08665	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g33642	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc12g100000.3.1	Solyc12g100000	U-box domain-containing protein 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Tin_g06679	No alias	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	624	662
IPR000225	Armadillo	707	744
IPR000225	Armadillo	542	580
IPR003613	Ubox_domain	252	323

External Links

No external refs found!