MA_10427606g0010

Description : methyl-tetrahydrofolate-dependent methionine synthase

Gene families : OG_01_0002593 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002593_tree ,
OG_02_0002149 (LandPlants) Phylogenetic Tree(s): OG_02_0002149_tree ,
OG_03_0002104 (SeedPlants) Phylogenetic Tree(s): OG_03_0002104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10427606g0010
Cluster	HCCA: Cluster_279

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00117110	evm_27.TU.AmTr_v1...	Amino acid metabolism.biosynthesis.aspartate...	0.06	Archaeplastida
AT3G03780	MS2, ATMS2	methionine synthase 2	0.04	Archaeplastida
AT5G17920	ATCIMS, ATMS1, ATMETS	Cobalamin-independent synthase family protein	0.06	Archaeplastida
Cre03.g180750	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.06	Archaeplastida
GSVIVT01029971001	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.03	Archaeplastida
LOC_Os12g42876.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.06	Archaeplastida
LOC_Os12g42884.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.04	Archaeplastida
MA_619693g0010	No alias	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.07	Archaeplastida
Mp1g04570.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.04	Archaeplastida
Smo171028	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.03	Archaeplastida
Solyc10g081510.2.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.06	Archaeplastida
Zm00001e003281_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.11	Archaeplastida
Zm00001e005228_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.05	Archaeplastida
Zm00001e012368_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.03	Archaeplastida
AMTR_s00004p00117110	evm_27.TU.AmTr_v1...	Amino acid metabolism.biosynthesis.aspartate...	0.06	LandPlants
AT3G03780	MS2, ATMS2	methionine synthase 2	0.04	LandPlants
AT5G17920	ATCIMS, ATMS1, ATMETS	Cobalamin-independent synthase family protein	0.06	LandPlants
GSVIVT01029971001	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.03	LandPlants
LOC_Os12g42876.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.05	LandPlants
LOC_Os12g42884.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.04	LandPlants
MA_619693g0010	No alias	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.07	LandPlants
Mp1g04570.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.03	LandPlants
Smo171028	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.03	LandPlants
Solyc10g081510.2.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.06	LandPlants
Zm00001e003281_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.11	LandPlants
Zm00001e005228_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.05	LandPlants
Zm00001e012368_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.03	LandPlants
AMTR_s00004p00117110	evm_27.TU.AmTr_v1...	Amino acid metabolism.biosynthesis.aspartate...	0.06	SeedPlants
AT3G03780	MS2, ATMS2	methionine synthase 2	0.04	SeedPlants
AT5G17920	ATCIMS, ATMS1, ATMETS	Cobalamin-independent synthase family protein	0.06	SeedPlants
GSVIVT01029971001	No alias	Amino acid metabolism.biosynthesis.aspartate...	0.03	SeedPlants
LOC_Os12g42876.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.05	SeedPlants
LOC_Os12g42884.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.04	SeedPlants
MA_619693g0010	No alias	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.07	SeedPlants
Solyc10g081510.2.1	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.06	SeedPlants
Zm00001e003281_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.11	SeedPlants
Zm00001e005228_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.05	SeedPlants
Zm00001e012368_P001	No alias	methyl-tetrahydrofolate-dependent methionine synthase	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008172	S-methyltransferase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0008652	cellular amino acid biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013215	Cbl-indep_Met_Synth_N	3	54
IPR002629	Met_Synth_C/arc	170	493

External Links

No external refs found!

MA_10427606g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation