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  5. Azfi_s0280.g062289

Azfi_s0280.g062289


Description : component *(Snu13) of snoRNP rRNA methylation complex & original description: CDS=1-450


Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0280.g062289
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00189790 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
AT4G12600 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 OrthoFinder output from all 47 species
AT5G20160 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 OrthoFinder output from all 47 species
Ala_g06081 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.03G070800.1 Ceric.03G070800 component *(Snu13) of snoRNP rRNA methylation complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000600.11 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Cre06.g249250 No alias RNA processing.RNA modification.rRNA/tRNA... 0.11 OrthoFinder output from all 47 species
Dac_g02506 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.03 OrthoFinder output from all 47 species
Dac_g29609 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g15283 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015520001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Gb_14400 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.06 OrthoFinder output from all 47 species
LOC_Os03g13800.1 LOC_Os03g13800 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.1 OrthoFinder output from all 47 species
MA_433779g0010 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.05 OrthoFinder output from all 47 species
Pp3c14_21860V3.1 Pp3c14_21860 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Pp3c17_18010V3.1 Pp3c17_18010 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species
Sam_g08742 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.06 OrthoFinder output from all 47 species
Sam_g08743 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.04 OrthoFinder output from all 47 species
Smo159569 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
Tin_g17080 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e001004_P001 Zm00001e001004 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.04 OrthoFinder output from all 47 species
Zm00001e038611_P002 Zm00001e038611 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 44 132
No external refs found!