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  5. Azfi_s0275.g061420

Azfi_s0275.g061420 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: CDS=229-1845


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0275.g061420

Target Alias Description ECC score Gene Family Method Actions
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G78080 RAP2.4 related to AP2 4 0.04 OrthoFinder output from all 47 species
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.04 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g17354 RAP2.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00138.t1 Aspi01Gene00138 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48933.t1 RAP2.2, Aspi01Gene48933 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.02 OrthoFinder output from all 47 species
Ehy_g06062 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g27365 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01028050001 HRE2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_06408 No alias transcription factor (DREB) 0.08 OrthoFinder output from all 47 species
Gb_39497 ERF7, ATERF7, ATERF-7 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g07120.1 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54050.1 LOC_Os02g54050 Ethylene-responsive transcription factor ERF018... 0.03 OrthoFinder output from all 47 species
LOC_Os05g39590.3 LOC_Os05g39590 Dehydration-responsive element-binding protein 2D... 0.04 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.03 OrthoFinder output from all 47 species
MA_203191g0010 ATERF3, ERF3 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_214532g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_55226g0020 No alias Ethylene-responsive transcription factor ERF016... 0.03 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
MA_9565296g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e033541_P001 Zm00001e033541 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 109 157
No external refs found!