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  5. Azfi_s0267.g061012

Azfi_s0267.g061012


Description : large subunit beta of AP-4 vacuole cargo adaptor complex & original description: CDS=211-2817


Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0267.g061012
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00033810 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
Ala_g16231 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Als_g46996 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ceric.37G056900.1 Ceric.37G056900 large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.39 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g07725 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
LOC_Os03g23950.1 LOC_Os03g23950 large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Lfl_g02298 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Mp6g09050.1 No alias large subunit beta of AP-4 vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Msp_g00711 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Nbi_g10984 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ore_g18294 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e001693_P001 Zm00001e001693 large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e020411_P002 Zm00001e020411 large subunit beta of AP-4 vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Zm00001e038184_P001 Zm00001e038184 large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR015151 B-adaptin_app_sub_C 752 862
IPR002553 Clathrin/coatomer_adapt-like_N 41 582
No external refs found!