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  5. Azfi_s0255.g060478

Azfi_s0255.g060478 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : not classified & original description: CDS=1-1518


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0255.g060478
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020878.26 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Nbi_g05874 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000001 PUM7, APUM7 not classified & original description: CDS=1-2403 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 246 271
IPR001313 Pumilio_RNA-bd_rpt 353 373
IPR001313 Pumilio_RNA-bd_rpt 427 444
IPR001313 Pumilio_RNA-bd_rpt 169 203
IPR001313 Pumilio_RNA-bd_rpt 388 422
IPR001313 Pumilio_RNA-bd_rpt 205 236
IPR001313 Pumilio_RNA-bd_rpt 281 313
IPR001313 Pumilio_RNA-bd_rpt 316 349
No external refs found!