Aliases : SOC1, AGL20, ATSOC1
Description : MADS/AGL-type transcription factor & original description: CDS=1-1014
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00218870 | ANR1, AGL44,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00025p00244880 | AGL61, DIA,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AT1G77980 | AGL66 | AGAMOUS-like 66 | 0.02 | OrthoFinder output from all 47 species | |
Ala_g28162 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11010 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g28471 | SHP2, AGL5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27230 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene05601.t1 | STK, AGL11,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene72145.t1 | AGL30, Aspi01Gene72145 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0009.g011722 | No alias | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0116.g046386 | AGL65 | MADS/AGL-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g13784 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g33793 | AGL14 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g50123 | AGL3, SEP4 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g10207 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g52340.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g11614.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g54160.1 | AGL7, AP1, LOC_Os03g54160 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g34940.1 | PI, LOC_Os05g34940 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g43740.1 | AGL65, LOC_Os11g43740 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g25148 | AGL10, CAL1, CAL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_20467g0020 | AGL10, CAL1, CAL | MADS-box transcription factor 6 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g07382 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g42970 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g19814 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g60105 | AGL18 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g29613 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g003429 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g18903 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g21681 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26111 | No alias | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo437868 | AGL29 | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g00452 | AGL3, SEP4 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g20318 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e018993_P001 | AGL62, Zm00001e018993 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e039610_P001 | AGL8, FUL, Zm00001e039610 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
No external refs found! |