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  5. Azfi_s0230.g059177

Azfi_s0230.g059177 (RACK1B_AT)


Aliases : RACK1B_AT

Description : component *(RACK1) of small ribosomal-subunit (SSU) proteome & original description: CDS=1-948


Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0230.g059177
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G48630 RACK1B_AT receptor for activated C kinase 1B 0.03 OrthoFinder output from all 47 species
AT3G18130 RACK1C_AT receptor for activated C kinase 1C 0.04 OrthoFinder output from all 47 species
Dac_g14184 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc03g119040.3.1 RACK1B_AT, Solyc03g119040 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc06g069010.3.1 RACK1B_AT, Solyc06g069010 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e032340_P001 RACK1C_AT, Zm00001e032340 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 145 178
IPR001680 WD40_repeat 56 90
IPR001680 WD40_repeat 186 220
IPR001680 WD40_repeat 9 44
IPR001680 WD40_repeat 283 310
IPR001680 WD40_repeat 235 260
IPR001680 WD40_repeat 96 132
No external refs found!