1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0213.g058277

Azfi_s0213.g058277 (TRFL8)


Aliases : TRFL8

Description : telomeric dsDNA-binding protein & original description: CDS=78-2120


Gene families : OG0003313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0213.g058277

Target Alias Description ECC score Gene Family Method Actions
Aob_g03444 TRFL6 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08481.t1 TRFL6, Aspi01Gene08481 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02890 TRFL6 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01219 TRFL6 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13485 TRFL6 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25755 No alias telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 586 633
No external refs found!