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  5. Azfi_s0173.g055821

Azfi_s0173.g055821 (UBP1B)


Aliases : UBP1B

Description : stress granule assembly factor *(UBP1) & original description: CDS=1-1287


Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0173.g055821
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Azfi_s1467.g103475 UBP1B stress granule assembly factor *(UBP1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
CC GO:0005929 cilium IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048870 cell motility IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 266 331
IPR000504 RRM_dom 106 176
IPR000504 RRM_dom 21 86
No external refs found!