Heatmap: Cluster_76 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
0.38 -4.52 -0.69 -0.1 -1.05 0.5 0.53 0.47 0.41 -0.48 -0.39 -0.33 0.83
0.92 -0.65 -0.59 -0.44 -0.42 -0.12 -0.04 -0.01 -0.2 -0.34 -0.5 -0.35 1.2
0.08 -3.12 -2.09 -0.61 -0.55 -0.35 -0.38 0.62 -0.35 0.79 0.09 -0.11 1.41
0.41 -1.85 -0.35 -0.19 -0.13 0.46 0.44 0.46 0.6 -0.57 -0.28 -0.43 -0.05
0.39 -4.04 -1.04 -0.91 -1.03 0.45 0.42 0.42 0.38 -0.24 -0.14 -0.01 1.02
0.62 -4.54 -0.19 -0.73 -2.16 0.13 0.36 0.27 -0.12 -0.06 -0.5 -0.08 1.38
0.5 -1.49 -0.46 -0.23 -0.22 0.57 0.67 0.68 0.53 -1.0 -0.92 -0.92 0.17
1.48 - - - - - 0.93 -0.14 -0.21 -1.49 -1.46 -0.12 2.29
0.29 -3.84 0.13 0.03 0.19 -0.1 -0.24 -0.11 -0.28 -0.05 -0.24 -0.1 1.12
0.51 -2.65 -0.31 -0.62 -1.12 0.55 0.55 0.75 0.93 -0.73 -0.7 -0.76 0.23
0.62 -4.02 -0.9 -0.3 -0.23 0.18 0.55 0.56 0.04 -0.08 -0.13 0.0 0.31
1.16 -3.16 -1.44 -0.33 -1.19 0.8 0.81 0.73 0.58 -1.67 -1.49 -1.29 0.39
0.42 -2.74 -1.06 0.16 -0.46 0.33 -0.12 0.12 0.57 -0.5 0.01 0.04 0.77
0.36 -2.99 -2.09 -0.25 -0.71 0.65 0.47 0.69 0.56 -0.69 -0.31 -0.61 0.82
1.54 -3.44 -1.83 -0.88 -1.45 -0.25 -0.54 -0.19 0.65 -0.03 -0.34 0.35 0.84
0.6 -3.74 -0.96 -0.51 -0.69 0.67 0.78 0.76 0.65 -0.7 -0.85 -0.71 0.31
0.45 -4.08 -0.17 0.04 -0.41 0.19 0.16 0.13 0.21 -0.16 -0.0 0.01 0.58
0.36 -2.0 -1.09 -0.03 0.01 -0.04 -0.26 -0.09 -0.22 0.63 0.44 0.51 0.11
0.48 -3.71 -1.09 -0.36 -1.09 0.59 0.42 0.62 0.83 -0.53 -0.45 -0.71 0.68
1.14 -1.92 -4.62 -2.86 -2.66 -0.19 0.0 0.42 0.05 0.41 0.42 0.53 0.88
0.61 -2.15 -1.04 -0.29 -0.73 0.5 0.71 0.61 0.62 -0.47 -0.65 -0.61 0.27
0.97 -2.77 -0.34 -1.48 -0.97 -0.1 -0.07 -0.05 0.44 0.11 0.35 0.2 0.62
0.29 -1.62 -0.38 -0.15 -0.12 0.36 0.21 0.13 0.45 -0.12 -0.19 -0.09 0.29
0.54 -4.13 -1.48 -1.27 -1.13 0.37 0.71 0.71 0.63 -0.4 -0.28 -0.28 0.8
2.52 -3.61 -2.05 -1.9 -0.78 -1.91 -1.46 -1.22 - -1.12 0.27 0.01 1.24
0.71 -4.13 -0.32 -0.27 -0.4 0.5 0.4 0.42 0.41 -0.37 -0.45 -0.44 0.35
0.14 -4.23 -0.0 0.49 0.36 -0.58 -0.37 -0.18 -0.39 0.04 -0.14 -0.1 1.15
0.59 -1.7 -1.15 -0.77 -0.59 0.13 0.33 0.57 0.86 -0.25 -0.34 -0.38 0.52
0.49 -4.24 -1.29 -1.27 -1.27 0.34 0.27 0.37 0.23 0.33 0.35 0.3 0.67
0.23 -2.73 -0.72 0.35 0.29 -0.86 -0.24 -0.83 -0.36 0.4 0.42 0.4 0.9
0.88 - - - - 1.01 0.89 0.42 0.9 -0.24 -0.74 -1.3 1.15
0.32 -1.98 -0.21 0.25 0.03 0.08 0.26 0.39 0.67 -0.11 -0.09 -0.02 -1.32
0.73 -2.54 -1.02 0.06 -0.19 0.26 0.59 0.6 0.56 -1.78 -0.88 -0.35 0.53
0.32 -2.43 -0.34 -0.44 -0.77 0.48 0.53 0.72 1.09 -0.67 -0.51 -0.6 -0.27
0.71 -1.89 -1.49 -0.9 -1.04 1.12 0.86 0.88 1.03 -1.77 -2.09 -2.03 0.1
0.81 -0.64 -0.7 0.06 -0.05 -0.22 -0.67 -1.65 -1.29 -0.15 -0.12 0.1 1.52
0.52 -2.1 -0.61 -0.49 -0.36 0.28 0.36 0.32 0.33 0.05 -0.1 -0.11 0.37
0.16 -1.92 -0.37 0.09 0.1 0.01 0.1 0.14 0.08 -0.11 0.02 0.13 0.53
0.93 -1.39 -8.84 -7.04 -7.39 0.22 0.37 0.35 0.47 -0.44 -0.65 -0.59 1.82
0.27 -0.98 -0.12 0.05 0.1 0.33 0.38 0.33 0.23 -0.23 -0.07 -0.02 -1.04
0.37 -2.49 -0.64 -0.44 -0.28 -0.29 0.15 0.27 -0.08 0.61 0.47 0.54 -0.17
0.64 -1.88 -1.6 0.07 -0.29 0.27 0.5 0.51 0.84 -0.42 -0.67 -0.38 -0.02
0.69 -2.99 - - - 0.69 0.74 0.95 0.59 -0.23 -0.27 -0.43 1.07
0.86 -3.22 - - - -0.12 0.57 0.67 0.51 0.47 0.02 0.02 1.17
0.65 -1.15 -1.21 -0.82 -1.05 0.33 0.7 0.62 0.59 -0.45 -0.41 -0.48 0.45
0.14 -1.21 -0.26 0.15 -0.02 0.07 0.14 0.1 0.45 -0.02 -0.08 -0.04 0.07
0.29 -2.94 -3.4 -1.86 -3.76 0.09 0.61 0.57 0.6 0.27 -0.21 0.05 1.33
0.15 -2.24 -0.35 -0.11 0.11 -0.02 -0.22 -0.25 -0.19 0.41 0.45 0.41 0.38
0.87 -1.65 -1.51 -0.38 -0.39 0.32 0.56 0.58 0.73 -0.68 -0.92 -0.6 0.35
0.67 -5.61 -2.76 -0.08 -1.75 0.67 -0.0 -0.21 -0.01 0.62 0.22 0.48 0.54
0.54 -4.45 -1.15 -0.92 -1.0 0.21 0.76 0.84 0.87 -0.53 -0.56 -0.51 0.55
0.99 -1.43 - -4.32 - 0.65 0.56 0.25 0.09 0.43 0.6 0.46 0.07

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.