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  5. Azfi_s0173.g055776

Azfi_s0173.g055776


Description : scaffold nucleoporin of nuclear pore complex *(NUP43) & original description: CDS=396-1820


Gene families : OG0006935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0173.g055776
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
MA_10430473g0010 No alias NUP43 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!