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  5. Azfi_s0168.g054623

Azfi_s0168.g054623 (PRA7, PRA1.F2)


Aliases : PRA7, PRA1.F2

Description : B-G-class Rab-GDF protein & original description: CDS=1-798


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0168.g054623
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Dde_g01946 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18356 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g121460.1.1 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e016549_P001 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 42 181
No external refs found!