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  5. Azfi_s0158.g053903

Azfi_s0158.g053903


Description : not classified & original description: CDS=1-579


Gene families : OG0000039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0158.g053903
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Ala_g07976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40557.t1 Aspi01Gene40557 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08225 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Pir_g59295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005466 No alias not classified & original description: CDS=1-228 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018446 No alias not classified & original description: CDS=1-660 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025445 No alias not classified & original description: CDS=1-363 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0042618 poly-hydroxybutyrate metabolic process IEP HCCA
BP GO:0042619 poly-hydroxybutyrate biosynthetic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901440 poly(hydroxyalkanoate) metabolic process IEP HCCA
BP GO:1901441 poly(hydroxyalkanoate) biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!