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  5. Azfi_s0147.g053043

Azfi_s0147.g053043 (RAN2)


Aliases : RAN2

Description : GTPase *(Ran) & original description: CDS=1-873


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0147.g053043
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Adi_g002593 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026180 RAN2 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054055 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39040 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene30500.t1 RAN3, ATRAN3,... GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45894 RAN2 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G019400.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50612012... 0.12 OrthoFinder output from all 47 species
Ceric.35G063800.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50581751... 0.16 OrthoFinder output from all 47 species
Dac_g44710 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07410 RAN2 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22288 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02691 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36246 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00842 RAN2 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16965 No alias GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19307 No alias GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g023800.3.1 RAN2, Solyc05g023800 Ran GTPase 0.03 OrthoFinder output from all 47 species
Spa_g05239 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g47199 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e027977_P001 RAN3, ATRAN3,... Ran GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 94 239
No external refs found!