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  5. Azfi_s0147.g053026

Azfi_s0147.g053026 (TTN7, SMC3)


Aliases : TTN7, SMC3

Description : component *(SMC3/TTN7) of cohesin regulator complex & original description: CDS=165-3554


Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0147.g053026
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT2G27170 TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein 0.03 OrthoFinder output from all 47 species
Als_g10466 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.05 OrthoFinder output from all 47 species
Aob_g19956 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033181001 TTN7, SMC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
LOC_Os02g04040.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g04050.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species
MA_10427183g0010 TTN7, SMC3 component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Ppi_g01382 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Solyc06g073780.4.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.04 OrthoFinder output from all 47 species
Spa_g10771 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Spa_g18879 TTN7, SMC3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032592_P001 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR010935 SMC_hinge 532 643
IPR003395 RecF/RecN/SMC_N 56 1159
No external refs found!