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  5. Azfi_s0139.g051213

Azfi_s0139.g051213


Description : deubiquitinase & original description: CDS=368-799


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0139.g051213

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0041.g026790 No alias deubiquitinase & original description: CDS=431-1120 0.03 OrthoFinder output from all 47 species
Ceric.10G055800.1 Ceric.10G055800 deubiquitinase & original description: pacid=50611696... 0.02 OrthoFinder output from all 47 species
Cre17.g698100 No alias Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
Ehy_g05454 No alias deubiquitinase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01009662001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os02g43840.1 LOC_Os02g43840 peptidase (PPPDE) 0.01 OrthoFinder output from all 47 species
Len_g55881 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25771 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07751 No alias deubiquitinase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g40125 No alias deubiquitinase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002326 No alias deubiquitinase & original description: CDS=7-807 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012252 No alias deubiquitinase & original description: CDS=239-715 0.01 OrthoFinder output from all 47 species
Sam_g09961 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Smo68072 No alias Protein degradation.peptidase families.cysteine-type... 0.12 OrthoFinder output from all 47 species
Spa_g08876 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56256 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000776_P001 Zm00001e000776 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Zm00001e037195_P002 Zm00001e037195 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 11 75
No external refs found!