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  5. Azfi_s0117.g046529

Azfi_s0117.g046529


Description : not classified & original description: CDS=1-4623


Gene families : OG0011225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0117.g046529
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aop_g08136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G113000.1 Ceric.01G113000 not classified & original description: pacid=50592503... 0.03 OrthoFinder output from all 47 species
Dac_g15558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009025 No alias not classified & original description: CDS=111-3764 0.05 OrthoFinder output from all 47 species
Spa_g15705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!