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  5. Azfi_s0112.g045762

Azfi_s0112.g045762


Description : not classified & original description: CDS=1-1434


Gene families : OG0002228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0112.g045762
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00037090 evm_27.TU.AmTr_v1... LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
Als_g41807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0427.g069267 No alias not classified & original description: CDS=1-1407 0.05 OrthoFinder output from all 47 species
Azfi_s0524.g075303 No alias not classified & original description: CDS=1-1419 0.04 OrthoFinder output from all 47 species
Ceric.01G011300.1 Ceric.01G011300 not classified & original description: pacid=50591588... 0.03 OrthoFinder output from all 47 species
Ceric.19G043000.1 Ceric.19G043000 not classified & original description: pacid=50575674... 0.04 OrthoFinder output from all 47 species
Ceric.23G045500.1 Ceric.23G045500 not classified & original description: pacid=50609704... 0.07 OrthoFinder output from all 47 species
Dac_g09254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011042001 No alias LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33690.3 LOC_Os05g33690 LRR receptor-like serine/threonine-protein kinase ERL1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g28480.1 LOC_Os06g28480 Brassinosteroid LRR receptor kinase BRL2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g42450.1 LOC_Os11g42450 LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
Len_g14890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g084420.1.1 Solyc06g084420 LRR receptor-like serine/threonine-protein kinase ERECTA... 0.03 OrthoFinder output from all 47 species
Spa_g50298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021093_P001 Zm00001e021093 Receptor-like protein kinase HSL1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e032579_P001 Zm00001e032579 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 185 245
No external refs found!