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  5. Azfi_s0110.g045476

Azfi_s0110.g045476 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR) & original description: CDS=196-3492


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0110.g045476
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g012443 TPL, WSIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053090 WSIP2, TPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117102 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Als_g27970 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G013800.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G073000.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G074400.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Gb_27991 TPR2 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Pir_g56913 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03281 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g008040.4.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e040187_P001 TPR1, Zm00001e040187 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 876 910
IPR001680 WD40_repeat 434 470
No external refs found!