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  5. Azfi_s0104.g044778

Azfi_s0104.g044778 (SCL30, At-SCL30)


Aliases : SCL30, At-SCL30

Description : not classified & original description: CDS=245-904


Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0104.g044778

Target Alias Description ECC score Gene Family Method Actions
Cre13.g573650 At-SCL28, SCL28 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Ehy_g02200 At-SCL30A, SCL30A RNA splicing factor *(SCL28/30/33) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0097354 prenylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!