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  5. Ehy_g03956

Ehy_g03956


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g03956

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g014211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g105498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008730 No alias not classified & original description: CDS=100-2877 0.03 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.05 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.05 OrthoFinder output from all 47 species
Dac_g09113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035354001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp3g07780.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g20268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46079 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g06700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000424 No alias not classified & original description: CDS=117-1961 0.03 OrthoFinder output from all 47 species
Sam_g52260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g07129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004417 hydroxyethylthiazole kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 251 317
IPR004088 KH_dom_type_1 342 413
No external refs found!