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  5. Azfi_s0095.g043647

Azfi_s0095.g043647


Description : component *(eL29) of large ribosomal-subunit (LSU) proteome & original description: CDS=196-432


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0095.g043647
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Als_g56710 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g28738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G077900.1 Ceric.22G077900 component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder output from all 47 species
Dac_g14001 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g48563 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.09 OrthoFinder output from all 47 species
LOC_Os05g28750.1 LOC_Os05g28750 component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.1 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.07 OrthoFinder output from all 47 species
Ppi_g34065 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g17848 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!