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Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-276
Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0094.g043410 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00260490 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00260730 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| AT1G26880 | No alias | Ribosomal protein L34e superfamily protein | 0.15 | OrthoFinder output from all 47 species | |
| AT1G69620 | RPL34 | ribosomal protein L34 | 0.16 | OrthoFinder output from all 47 species | |
| AT3G28900 | No alias | Ribosomal protein L34e superfamily protein | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g023873 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g049423 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107643 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g128643 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19937 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g25898 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25989 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene60347.t1 | Aspi01Gene60347 | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029897 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.29G078700.1 | Ceric.29G078700 | component *(eL34) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.34G068800.1 | Ceric.34G068800 | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000632.3 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cre16.g661050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | OrthoFinder output from all 47 species | |
| Dac_g02443 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g20175 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g27998 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g28753 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g43816 | RPL34 | component *(eL34) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g15490 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g23903 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011419001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01019985001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_36060 | No alias | component RPL34 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os08g06040.1 | LOC_Os08g06040 | component RPL34 of LSU proteome component | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os08g33920.1 | LOC_Os08g33920 | component RPL34 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os09g24690.1 | LOC_Os09g24690 | component RPL34 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| Len_g06750 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g26380 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g31825 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_109553g0010 | No alias | component RPL34 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| MA_175574g0010 | No alias | component RPL34 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| MA_7581523g0010 | No alias | component RPL34 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| Mp4g17040.1 | No alias | component RPL34 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g09133 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g20020 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g10506 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g53253 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g66658 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c11_2940V3.1 | RPL34, Pp3c11_2940 | Ribosomal protein L34e superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c11_3090V3.1 | RPL34, Pp3c11_3090 | Ribosomal protein L34e superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_1800V3.1 | RPL34, Pp3c1_1800 | Ribosomal protein L34e superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c25_11980V3.1 | Pp3c25_11980 | Ribosomal protein L34e superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c2_34570V3.1 | Pp3c2_34570 | Ribosomal protein L34e superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c7_21380V3.1 | Pp3c7_21380 | Ribosomal protein L34e superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g05824 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g14297 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g22792 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g23859 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g35945 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g46511 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo113433 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc05g007560.3.1 | Solyc05g007560 | component RPL34 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Solyc06g069860.4.1 | Solyc06g069860 | component RPL34 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g28558 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g26519 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g42684 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004116_P001 | Zm00001e004116 | component RPL34 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e021733_P002 | Zm00001e021733 | component RPL34 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e034114_P001 | Zm00001e034114 | component RPL34 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e040229_P001 | Zm00001e040229 | component RPL34 of LSU proteome component | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |