1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0092.g043147

Azfi_s0092.g043147 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : EC_5.5 intramolecular lyase & original description: CDS=543-2831


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0092.g043147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00046860 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.02 OrthoFinder output from all 47 species
Gb_13692 TPS02 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_10425884g0020 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Ore_g20199 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22862 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g005720.4.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 194 401
IPR005630 Terpene_synthase_metal-bd 444 705
No external refs found!