1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0092.g043112

Azfi_s0092.g043112 (GC5)


Aliases : GC5

Description : Golgin-type membrane tethering protein *(GC5/TMF) & original description: CDS=27-2741


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0092.g043112
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Aop_g09136 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Ceric.20G030700.1 GC5, Ceric.20G030700 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Cre03.g187000 GC5 Golgin candidate 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre09.g400812 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g19932 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.02 OrthoFinder output from all 47 species
Tin_g20654 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Zm00001e026507_P001 GC5, Zm00001e026507 golgin (GC5/TMF) 0.04 OrthoFinder output from all 47 species
Zm00001e026510_P001 GC5, Zm00001e026510 Golgin candidate 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 786 889
IPR022092 TMF_DNA-bd 369 437
No external refs found!