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Description : component *(eL43) of large ribosomal-subunit (LSU) proteome & original description: CDS=250-528
Gene families : OG0003192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003192_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0083.g038895 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00151080 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00089090 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G60245 | No alias | Zinc-binding ribosomal protein family protein | 0.16 | OrthoFinder output from all 47 species | |
| Adi_g039360 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g10789 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77659 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G064400.1 | Ceric.22G064400 | component *(eL43) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G044800.1 | Ceric.28G044800 | component *(eL43) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000718.64 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Cre06.g257150 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Dac_g40944 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01013278001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | OrthoFinder output from all 47 species | |
| GSVIVT01018328001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | OrthoFinder output from all 47 species | |
| Gb_13072 | No alias | component RPL37a of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os01g48770.2 | LOC_Os01g48770 | component RPL37a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g48320.1 | LOC_Os05g48320 | component RPL37a of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Lfl_g19853 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| MA_158457g0010 | No alias | component RPL37a of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| MA_4732g0010 | No alias | component RPL37a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g08340.1 | No alias | component RPL37a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g09590.1 | No alias | component RPL37a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g39472 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g28779 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c11_2550V3.1 | Pp3c11_2550 | Zinc-binding ribosomal protein family protein | 0.14 | OrthoFinder output from all 47 species | |
| Pp3c2_34770V3.1 | Pp3c2_34770 | Zinc-binding ribosomal protein family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c3_1620V3.1 | Pp3c3_1620 | Zinc-binding ribosomal protein family protein | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c7_21150V3.1 | Pp3c7_21150 | Zinc-binding ribosomal protein family protein | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g20996 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0045.g013308 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23324 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g48775 | No alias | component *(eL43) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo227221 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc08g007140.4.1 | Solyc08g007140 | component RPL37a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g077710.3.1 | Solyc08g077710 | component RPL37a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| Solyc08g077720.3.1 | Solyc08g077720 | component RPL37a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e008395_P001 | Zm00001e008395 | component RPL37a of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e013684_P001 | Zm00001e013684 | component RPL37a of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e025201_P002 | Zm00001e025201 | component RPL37a of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026482_P001 | Zm00001e026482 | component RPL37a of LSU proteome component | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |