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  5. Azfi_s0083.g038882

Azfi_s0083.g038882


Description : not classified & original description: CDS=1-501


Gene families : OG0000331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0083.g038882
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Ceric.30G016900.1 Ceric.30G016900 not classified & original description: pacid=50607966... 0.03 OrthoFinder output from all 47 species
Dcu_g05296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g32580.1 LOC_Os03g32580 Leucine-rich repeat protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g17938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04150.1 No alias LRR receptor kinase SERK2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g02668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 70 127
IPR013210 LRR_N_plant-typ 25 64
No external refs found!