Azfi_s0081.g038547 (VPS26B)

Aliases : VPS26B

Description : component *(VPS26) of Retromer protein recycling complex & original description: CDS=68-580

Gene families : OG0003204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003204_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0081.g038547

Target	Alias	Description	ECC score	Gene Family Method
AT5G53530	VPS26A	vacuolar protein sorting 26A	0.02	OrthoFinder output from all 47 species
Aop_g02794	VPS26B	component *(VPS26) of Retromer protein recycling complex...	0.05	OrthoFinder output from all 47 species
Aop_g67173	VPS26B	component *(VPS26) of Retromer protein recycling complex...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020589.5	VPS26B	Vesicle trafficking.endomembrane trafficking.protein...	0.02	OrthoFinder output from all 47 species
GSVIVT01038607001	VPS26B	Vesicle trafficking.endomembrane trafficking.protein...	0.03	OrthoFinder output from all 47 species
LOC_Os11g41130.2	VPS26B, LOC_Os11g41130	component VPS26 of Retromer protein recycling complex	0.02	OrthoFinder output from all 47 species
Mp1g01930.1	VPS26B	component VPS26 of Retromer protein recycling complex	0.02	OrthoFinder output from all 47 species
Smo109782	VPS26B	Vesicle trafficking.endomembrane trafficking.protein...	0.03	OrthoFinder output from all 47 species
Spa_g09782	VPS26B	component *(VPS26) of Retromer protein recycling complex...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028934	Vps26-related	1	177

External Links

No external refs found!