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  5. Azfi_s0079.g038429

Azfi_s0079.g038429 (EMB2762)


Aliases : EMB2762

Description : SSU processome assembly factor *(NOC4) & original description: CDS=206-2197


Gene families : OG0004927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0079.g038429

Target Alias Description ECC score Gene Family Method Actions
Cre01.g068377 EMB2762 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g03035 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
Mp1g06620.1 EMB2762 SSU processome assembly factor (NOC4) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 346 523
No external refs found!