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  5. Azfi_s0077.g037965

Azfi_s0077.g037965 (HEMB1)


Aliases : HEMB1

Description : EC_4.2 carbon-oxygen lyase & original description: CDS=83-1387


Gene families : OG0006175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0077.g037965

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00259220 HEMB1,... Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Adi_g020743 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07164 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06542 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.8 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder output from all 47 species
Cre02.g091050 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Dde_g02754 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008851001 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Gb_13789 HEMB1 porphobilinogen synthase 0.04 OrthoFinder output from all 47 species
Mp1g22820.1 HEMB1 porphobilinogen synthase 0.11 OrthoFinder output from all 47 species
Msp_g29344 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05454 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06304 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000572 HEMB1 EC_4.2 carbon-oxygen lyase & original description: CDS=52-1308 0.04 OrthoFinder output from all 47 species
Sam_g23811 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g069030.4.1 HEMB1, Solyc08g069030 porphobilinogen synthase 0.03 OrthoFinder output from all 47 species
Zm00001e013205_P001 HEMB1, Zm00001e013205 porphobilinogen synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR001731 ALAD 110 427
No external refs found!