Azfi_s0076.g037929

Description : E3 ubiquitin ligase & original description: CDS=24-2345

Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0076.g037929
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00155p00026110	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G54790	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G67340	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Aob_g26980	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g37110	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08238	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g01285	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.27G022700.1	Ceric.27G022700	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G024400.1	Ceric.33G024400	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g06527	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08821	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10339816g0010	No alias	U-box domain-containing protein 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g26671	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09758	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g51937	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g014230.4.1	Solyc01g014230	U-box domain-containing protein 4 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Tin_g06679	No alias	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019045_P001	Zm00001e019045	U-box domain-containing protein 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	522	559
IPR000225	Armadillo	603	641
IPR000225	Armadillo	688	724
IPR003613	Ubox_domain	252	322

External Links

No external refs found!

Azfi_s0076.g037929

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation