Heatmap: Cluster_33 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-1.88 -2.19 0.93 1.16 1.5 -2.63 -2.85 -2.36 -1.85 0.53 0.66 0.77 -4.57
-2.5 -1.04 1.38 1.06 1.52 -2.81 -1.8 -2.17 -2.33 0.25 0.46 0.3 -2.81
-1.42 -1.07 1.11 1.24 0.28 0.0 -0.47 -1.14 -0.65 -0.14 0.09 -0.03 -0.6
-0.4 -3.81 1.24 0.74 0.71 -0.62 -0.6 -0.94 -0.96 0.25 0.25 0.29 -0.87
-0.82 -5.03 1.14 1.43 0.4 -0.16 -0.77 -0.91 -0.8 -0.34 -0.21 -0.24 0.15
-2.14 -1.29 1.29 1.42 1.15 -3.16 -2.88 -2.97 -2.32 0.42 0.56 0.62 -3.35
-1.1 -3.04 0.75 0.85 1.02 -0.53 -0.73 -0.9 -0.51 0.22 0.39 0.32 -0.66
-2.71 -1.87 1.27 1.24 1.01 -4.33 -3.79 -4.42 -4.5 0.65 1.06 0.93 -4.96
-1.77 -4.25 1.11 1.03 0.74 0.01 -0.61 -1.1 -0.97 0.26 0.34 0.31 -1.19
-2.05 -1.04 1.47 1.7 0.56 -3.02 -1.54 -2.07 -2.67 0.14 0.17 0.29 -1.09
-1.15 -2.98 0.75 0.77 0.62 -0.61 -0.84 -1.05 -0.69 0.52 0.61 0.58 -0.47
-1.22 -3.28 1.28 1.25 0.62 0.01 -0.36 -0.79 -0.38 -0.61 -0.35 -0.44 -0.32
-1.13 -3.98 0.94 0.91 0.98 -0.68 -0.7 -0.93 -0.93 0.24 0.35 0.28 -0.41
-0.61 -1.93 0.67 0.75 0.72 -0.27 -0.2 -0.16 -0.12 0.01 0.09 0.17 -1.17
-3.2 -0.56 1.42 1.34 0.96 -3.44 -3.77 -7.25 -5.33 0.66 0.66 0.76 -5.8
-1.0 -2.02 0.73 1.03 0.55 -1.28 -1.26 -1.31 -1.02 0.6 0.6 0.72 -0.57
-1.01 -3.62 1.06 1.23 1.16 -1.33 -1.29 -1.09 -1.24 -0.0 0.0 0.16 -0.1
-2.3 -3.86 1.31 0.86 0.78 -2.88 -2.6 -2.44 -2.09 0.63 0.87 0.87 -0.32
-0.5 -5.43 1.14 1.4 0.44 0.09 -0.19 -0.3 -0.36 -0.63 -0.58 -0.54 -0.93
-0.99 -3.73 1.01 1.05 0.84 -3.43 -3.18 -2.62 -1.66 0.74 0.82 0.87 -0.7
-0.5 -2.8 0.71 0.68 0.42 -0.45 -0.29 -0.96 -0.8 0.26 0.47 0.37 0.09
-0.54 -1.58 0.86 0.36 0.58 -0.16 -0.52 -0.85 -0.44 0.22 0.41 0.36 -0.48
-2.31 - 1.18 1.53 2.04 -3.15 -2.47 -2.01 -1.72 -0.49 -0.16 -0.16 -2.32
-1.43 -5.35 1.5 1.56 1.31 -2.22 -1.69 -2.46 -1.85 -0.18 -0.01 -0.03 -0.95
-1.04 -5.54 1.46 1.57 0.67 -1.07 -1.05 -1.25 -1.3 -0.36 -0.18 -0.21 -0.22
-2.13 -2.74 1.26 1.71 0.96 -2.46 -2.09 -2.15 -1.26 0.33 0.29 0.45 -3.31
-0.69 -1.72 0.94 0.81 0.63 -0.2 -0.61 -1.12 -0.75 0.36 0.24 0.53 -1.45
-0.49 -2.79 0.9 0.99 0.24 0.16 -0.25 -0.78 -0.28 0.03 0.21 0.25 -1.43
-1.21 -2.53 1.08 0.85 0.94 -1.18 -1.18 -1.81 -1.7 0.77 0.59 0.75 -2.4
-0.61 -5.4 0.96 0.88 0.48 -1.0 -0.74 -0.78 -0.57 0.45 0.62 0.61 -1.47
-3.11 -4.07 1.59 1.57 1.43 -4.18 -3.82 -4.83 -5.79 0.37 0.46 0.36 -5.13
-1.32 -1.39 0.95 0.95 0.93 -0.97 -1.72 -2.69 -1.58 0.63 0.93 0.69 -3.53
-3.09 -2.69 0.78 1.36 1.59 -4.1 -4.45 -6.35 - 0.71 0.91 0.8 -4.07
-1.1 -5.04 1.3 1.5 0.81 -1.84 -1.73 -1.98 -1.99 0.35 0.56 0.47 -2.07
-0.63 -4.03 1.07 0.92 0.82 -0.33 -0.38 -0.6 -0.56 0.04 0.16 0.1 -1.28
-1.54 -2.11 0.84 0.93 0.32 -0.78 -0.62 -0.63 -0.22 0.3 0.58 0.63 -1.13
-2.95 - 1.11 1.38 0.84 -1.06 -1.5 -1.61 -1.02 0.63 0.51 0.59 -2.38
-0.68 -1.54 1.09 1.04 0.84 -0.78 -1.0 -1.24 -1.13 0.3 0.34 0.3 -1.48
-0.41 -2.15 1.1 1.14 0.58 -0.23 -0.36 -0.47 -0.51 -0.42 -0.21 -0.41 -0.39
-1.33 -2.91 0.89 0.8 0.87 -1.11 -0.57 -0.32 -0.71 0.49 0.54 0.57 -2.63
-0.87 -2.59 0.56 0.57 0.66 -0.14 -0.32 -0.58 -0.41 0.35 0.42 0.5 -0.75
-0.59 -2.8 0.46 0.36 0.79 -0.07 -0.81 -1.03 -1.02 0.5 0.58 0.55 -0.13
-2.01 -7.0 1.51 1.6 0.81 -2.63 -2.66 -2.43 -2.73 0.18 0.28 0.27 -0.14
-1.51 -2.55 1.1 0.91 1.13 -1.55 -1.7 -1.8 -1.86 0.66 0.79 0.76 -4.44
-3.06 -5.52 0.99 1.24 1.96 -2.98 -2.77 -2.82 -3.79 0.65 0.03 0.52 -3.41
-1.13 -2.11 0.65 1.22 1.24 -0.52 -0.69 -1.07 -1.12 0.16 0.22 0.31 -1.79
-1.67 -3.91 1.39 0.99 1.06 -0.3 -0.35 -0.42 -0.12 -0.44 -0.34 -0.33 -1.58
-0.67 -1.34 0.7 0.68 0.34 0.22 -0.29 -0.52 -0.42 0.03 0.35 0.13 -0.59
-1.43 -5.03 0.63 1.59 1.17 -1.18 -0.81 -0.66 -0.42 -0.22 0.1 -0.04 -1.05
-0.61 -3.52 1.08 1.07 0.8 -0.72 -0.41 -0.49 -0.69 0.01 0.1 0.12 -1.22
-0.97 -1.81 0.51 1.33 0.97 -4.04 -2.79 -2.9 -2.56 0.74 0.86 0.97 -1.54
-3.42 -3.67 1.87 1.01 1.18 -8.15 -6.3 -7.71 -6.5 0.46 0.82 0.77 -6.43
-0.58 -3.3 0.8 0.66 0.15 -0.18 -0.05 -0.24 -0.09 0.08 0.11 0.11 -0.08
-0.56 -1.98 0.82 0.78 0.69 -0.72 -0.83 -0.79 -0.45 0.31 0.32 0.57 -0.99
-0.55 -1.15 0.76 0.65 0.57 -0.43 -0.65 -0.93 -0.4 0.22 0.43 0.35 -0.57
-0.84 -1.71 0.9 0.79 0.57 -0.27 -0.66 -0.94 -0.24 0.24 0.33 0.22 -0.64
-1.65 -2.2 1.13 1.0 0.82 -0.65 -0.77 -1.47 -0.89 0.3 0.35 0.41 -0.84
-1.87 -2.43 0.79 1.43 1.8 -3.53 -3.23 -4.06 -3.66 0.28 0.32 0.49 -1.28
-0.62 -2.6 0.77 0.89 0.58 -0.27 -0.27 -0.48 -0.23 0.05 0.08 0.01 -0.33
-0.93 -1.33 0.77 0.87 0.87 -0.91 -0.96 -1.01 -0.8 0.27 0.29 0.35 -0.16
-4.3 -2.83 1.23 1.74 1.04 -4.65 -3.37 -4.02 -4.36 0.62 0.52 0.66 -1.85
-0.85 -0.74 0.47 1.04 0.78 -1.15 -1.52 -1.81 -1.45 0.6 0.59 0.78 -1.02
-0.59 -1.86 0.75 0.66 0.74 -0.75 -0.77 -0.97 -0.61 0.49 0.58 0.69 -1.95
-2.49 -1.67 1.22 1.42 1.55 -4.5 -3.46 -4.03 -3.3 0.51 0.46 0.55 -6.44
-0.97 -3.5 0.86 0.73 0.73 -0.56 -0.53 -0.63 -0.39 0.35 0.45 0.37 -0.83
-3.46 -1.56 1.05 1.18 1.26 -4.05 -3.82 -4.06 -3.81 0.74 0.89 1.0 -4.19
-0.9 -1.83 1.26 1.77 0.77 -1.92 -1.28 -1.82 -1.02 -0.46 -0.09 -0.29 -0.41
-1.33 -1.53 1.0 0.99 1.05 -0.92 -0.79 -0.73 -0.66 -0.01 0.0 0.06 -0.27
-2.63 -2.34 0.99 1.3 1.36 -2.47 -2.36 -2.73 -1.24 0.65 0.37 0.66 -2.13
-0.87 -2.22 0.69 0.79 0.6 -0.82 -0.63 -0.73 -0.57 0.51 0.49 0.6 -0.84
-0.59 -4.95 1.62 1.0 0.76 -0.38 -0.85 -1.28 -1.02 -0.19 0.04 0.08 -1.48
-1.64 -2.22 1.43 1.09 0.73 -0.24 -0.61 -0.99 -0.42 -0.42 -0.15 -0.51 -0.17
-1.1 -2.42 1.06 1.11 0.53 -1.14 -0.85 -0.65 -0.17 0.39 0.24 0.36 -1.55
-0.63 -2.55 0.76 0.67 0.81 -0.34 -0.63 -0.85 -0.53 0.3 0.32 0.4 -0.57
-0.53 -3.03 0.73 0.95 0.23 -0.37 -0.27 -0.33 -0.32 0.13 0.18 0.12 -0.13
-0.81 -0.9 1.1 1.04 0.53 0.12 -0.9 -1.61 -0.74 -0.23 0.02 0.11 -0.4
-4.69 -4.07 1.54 1.42 1.9 -5.53 -4.21 -5.82 -6.37 0.18 0.12 0.33 -5.62
-0.83 -3.11 1.17 1.14 0.94 -1.51 -1.11 -0.81 -1.36 0.3 0.39 0.45 -1.91
-0.65 -5.83 0.92 0.94 0.35 -0.66 -0.78 -0.92 -0.78 0.19 0.41 0.37 0.22
-1.07 -3.38 0.76 0.96 0.63 -0.99 -1.17 -1.57 -1.15 0.67 0.64 0.67 -0.38
-1.43 -0.86 1.07 1.04 0.95 -0.35 -1.4 -2.14 -1.99 0.27 0.4 0.38 -0.93
-1.88 -1.34 0.39 1.48 1.16 -2.42 -3.14 -3.26 -2.64 0.63 0.78 0.89 -1.68
-1.21 -4.46 0.76 1.08 1.14 -2.67 -2.58 -3.76 -3.24 0.69 0.96 1.09 -1.67
-1.02 -1.07 0.67 0.67 0.67 -0.69 -0.7 -0.9 -0.44 0.42 0.54 0.54 -1.02
-7.18 -3.9 1.57 1.54 1.68 -6.4 -9.36 - -8.0 0.36 0.29 0.09 -1.91
-0.54 -3.67 0.82 0.82 0.48 -0.55 -0.6 -0.7 -0.51 0.25 0.31 0.36 -0.1
-0.88 -2.81 0.78 0.57 0.72 -0.3 -0.44 -0.66 -0.34 0.23 0.34 0.37 -0.39
-1.87 -4.62 0.92 1.23 0.6 -2.13 -1.93 -1.94 -1.69 0.78 0.92 0.87 -1.2
-1.74 -2.84 1.38 1.27 1.16 -1.66 -1.99 -2.7 -1.77 0.39 0.23 0.32 -0.8
-0.85 -2.09 1.01 0.65 0.76 -0.38 -0.45 -0.86 -0.23 0.04 0.3 0.19 -0.69
-0.88 -4.61 1.24 0.73 1.28 -1.65 -1.2 -1.25 -1.43 0.28 0.3 0.33 -0.5
-2.16 -4.53 1.07 1.34 1.72 -1.28 -1.46 -1.55 -0.82 -0.3 0.14 -0.21 -1.55
-2.73 -2.75 0.8 1.22 1.22 -3.05 -2.27 -1.9 -2.55 0.94 0.63 0.96 -3.16
-1.65 -2.01 1.05 0.84 0.69 -1.03 -1.11 -1.45 -0.91 0.69 0.59 0.82 -2.22
-1.05 -5.24 0.53 1.2 0.85 -4.0 -2.46 -1.57 -1.0 0.98 0.89 1.01 -4.5
-2.03 -1.08 1.32 1.09 1.56 -2.59 -2.25 -2.82 -1.53 0.05 0.46 0.48 -4.71
-0.57 -2.67 1.05 1.18 0.63 -0.63 -0.63 -0.58 -0.81 -0.05 -0.01 0.01 -0.34
-1.75 -2.46 0.85 1.24 1.3 -1.27 -1.52 -1.92 -1.88 0.5 0.41 0.41 -0.94
-0.3 -1.63 1.16 1.16 0.13 0.1 -0.36 -0.47 -0.21 -0.74 -0.44 -0.6 -0.19
-0.44 -3.93 1.09 1.14 0.85 -0.58 -0.79 -1.33 -1.29 0.19 0.25 0.12 -0.74
-1.46 -3.17 0.84 1.17 0.69 -0.94 -0.97 -1.11 -0.81 0.39 0.62 0.68 -1.42
-0.77 -2.25 0.99 0.91 1.0 -0.51 -0.56 -0.79 -0.24 0.16 0.18 0.26 -3.53
-1.32 -3.64 1.34 1.44 0.6 -3.98 -4.17 -6.53 -2.49 0.69 0.94 0.95 -7.96
-0.5 -2.91 0.64 0.77 0.32 -0.23 -0.11 -0.23 -0.34 0.13 0.32 0.32 -0.65
-0.47 -2.39 0.36 0.42 0.6 0.0 -0.27 -0.52 0.08 0.35 0.42 0.42 -1.24
-0.94 -4.56 0.78 1.05 0.46 -0.33 -0.61 -0.82 -0.73 0.43 0.44 0.52 -0.96
-0.85 -1.91 0.8 0.81 0.7 -0.78 -0.76 -1.24 -0.93 0.51 0.57 0.64 -1.06
-2.77 -3.87 1.36 1.24 1.95 -7.88 -5.26 -8.52 -5.04 0.5 0.28 0.28 -3.84
-1.09 -3.82 1.24 1.06 0.55 -1.19 -1.34 -1.27 -1.19 0.48 0.6 0.37 -0.61
-0.59 -0.81 0.84 0.55 0.58 -0.52 -0.75 -1.16 -0.8 0.35 0.6 0.47 -0.88
-0.51 -2.58 1.46 1.39 0.89 -0.07 -0.7 -1.23 -0.64 -0.98 -1.07 -1.15 -0.26
-1.04 -4.92 1.18 1.17 1.09 -0.61 -0.82 -1.01 -0.94 -0.1 -0.09 -0.02 -0.44
-1.68 -3.13 0.72 0.78 0.94 -1.05 -1.32 -1.22 -1.2 0.44 0.68 0.73 -0.12
-2.0 -3.39 1.47 0.92 1.77 -4.7 -5.09 -4.72 -6.12 -0.11 0.54 0.7 -1.14
-0.91 -2.13 0.64 1.06 0.94 -1.43 -1.01 -1.39 -0.98 0.6 0.6 0.68 -1.78
-1.63 -2.39 0.9 1.08 0.71 -0.52 -0.52 -0.74 -0.21 0.38 0.2 0.39 -1.87
-0.51 -2.06 1.16 1.19 0.46 -0.8 -0.72 -0.79 -0.64 -0.05 0.07 0.14 -0.64
-2.75 -1.87 1.06 1.22 1.01 -2.7 -2.93 -3.26 -3.08 0.78 0.99 0.91 -4.21
-0.64 -1.43 0.53 0.39 0.83 0.03 -0.29 -0.57 -0.03 0.19 0.2 0.36 -1.38
-2.14 -1.37 1.17 1.18 0.8 -1.86 -1.95 -2.0 -1.73 0.53 0.6 0.67 -1.03
-4.35 -4.37 0.8 1.3 1.73 -2.84 -1.71 -4.15 -3.92 0.61 0.56 0.73 -2.66
-0.7 -2.25 0.64 0.61 0.94 -0.28 -0.52 -0.63 -0.32 0.41 0.29 0.42 -1.67
-0.76 -3.18 0.64 0.69 0.78 -0.8 -0.6 -0.63 -0.59 0.64 0.58 0.57 -1.6
-0.77 -4.15 0.64 1.02 -0.02 -0.04 -0.16 -0.16 -0.19 0.14 0.18 0.15 -0.31
-0.67 -1.67 1.06 0.56 1.1 -0.98 -1.34 -1.49 -1.38 0.64 0.41 0.63 -1.81
-0.81 -4.52 1.35 1.25 0.66 -0.36 -0.51 -0.61 -0.68 -0.42 -0.28 -0.37 -0.36
-1.48 -6.37 1.48 1.57 0.37 -0.93 -1.11 -1.23 -1.31 -0.02 0.2 0.22 -1.12
-1.18 -5.33 0.87 1.38 1.62 -1.54 -1.31 -1.39 -1.26 0.12 0.15 0.26 -3.55
-2.0 -8.42 1.08 1.57 1.3 -0.62 -0.52 -0.81 -1.04 -0.18 -0.04 -0.13 -4.77
-0.54 -3.27 0.96 0.77 1.24 -0.43 -1.37 -1.96 -1.52 0.47 0.6 0.42 -2.17
-1.89 -4.0 1.26 1.14 0.45 -0.58 -0.47 -0.32 0.13 -0.15 0.42 0.14 -3.77
-1.11 -1.52 0.26 1.33 1.05 -0.51 -0.19 -0.15 -0.36 -0.03 -0.13 0.03 -2.18
-1.32 -2.97 0.88 1.3 0.76 -1.3 -1.48 -1.54 -1.34 0.47 0.47 0.62 -0.59
-2.44 -7.21 1.41 1.25 1.65 -4.63 -4.72 -5.32 -3.33 0.47 0.49 0.53 -2.21
-1.18 -0.82 1.12 1.44 0.67 -4.82 -2.64 -3.13 -4.14 0.7 0.74 0.89 -6.98
-1.84 -1.71 1.0 1.34 0.94 -2.43 -1.98 -1.86 -1.86 0.79 0.53 0.71 -2.63
-3.05 -2.91 0.83 1.64 1.19 -4.29 -3.69 -3.59 -4.41 0.91 0.49 0.74 -1.48
-1.75 -10.03 1.51 1.52 1.56 -3.45 -4.3 - -3.05 0.23 0.34 0.39 -5.17
-1.46 -3.67 1.31 1.31 1.87 -3.16 -2.78 -3.26 -2.39 0.01 -0.32 0.14 -1.07
-0.81 -0.31 1.6 1.56 0.6 -3.66 -3.1 -3.02 -1.72 -0.43 -0.47 -0.23 0.26
-0.52 -5.13 0.53 0.62 0.66 -0.32 -0.46 -0.76 -0.38 0.59 0.6 0.53 -1.48
-1.0 -3.31 0.91 1.01 0.67 -1.06 -1.0 -1.14 -0.97 0.37 0.45 0.54 -0.24
-2.79 -3.22 1.63 1.58 1.08 -3.0 -3.22 -2.98 -2.57 0.1 0.53 0.16 -1.26
-0.81 -2.01 1.2 0.93 0.84 -0.59 -0.78 -0.9 -0.69 0.16 0.27 0.18 -1.63
-0.53 -4.22 1.12 0.59 0.41 -0.6 -0.79 -1.2 -0.82 0.32 0.75 0.5 -0.6
-5.42 -5.01 1.52 1.92 1.44 - -3.76 -4.76 -4.62 0.11 0.42 -0.02 -4.57
-0.99 -2.53 0.93 0.72 1.23 -1.2 -0.73 -0.45 -1.01 0.49 0.29 0.44 -2.57
-3.07 - 0.7 1.93 1.36 -3.58 -3.15 - - 0.62 0.6 0.7 -
-2.44 -6.87 1.41 1.81 1.78 -1.68 -2.82 - -1.51 -0.25 -0.41 -0.33 -
-2.63 - 1.8 1.58 1.28 -0.24 -0.53 -1.48 -3.66 -1.05 -1.49 -0.11 -2.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.