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  5. Azfi_s0073.g037176

Azfi_s0073.g037176 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: CDS=746-2101


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0073.g037176
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Als_g12464 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s3216.g115058 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g16860 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78284 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14735 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15089 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 134 419
IPR001810 F-box_dom 73 119
No external refs found!