- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : TIR5, MSG1, NPH4, IAA23, IAA25, IAA21, BIP, ARF7
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G77850 | ARF17 | auxin response factor 17 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13618 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04069 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G078200.1 | ARF6, Ceric.10G078200 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020904.93 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07132 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32404 | ARF4 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07404 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016361 | ARF16 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0142.g022838 | ARF1 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05322 | ARF8, ATARF8 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 230 | 308 |
| No external refs found! |