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Description : E4 polyubiquitination factor *(UAP) & original description: CDS=188-1834
Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0054.g033608 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00125550 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT4G28300 | No alias | Protein of unknown function (DUF1421) | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g052712 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g05434 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G093800.1 | Ceric.12G093800 | E4 polyubiquitination factor *(UAP) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.23G080900.1 | Ceric.23G080900 | E4 polyubiquitination factor *(UAP) & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01020546001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032424001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Len_g47564 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07262 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28018 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35173 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g24132 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024333 | No alias | E4 polyubiquitination factor *(UAP) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19222 | No alias | E4 polyubiquitination factor *(UAP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo446314 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053990.4.1 | Solyc07g053990 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g008340.4.1 | Solyc10g008340 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010820 | DUF1421 | 491 | 534 |
| No external refs found! |