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  5. Azfi_s0052.g031528

Azfi_s0052.g031528


Description : CWF19-type post-transcriptionally regulatory factor & original description: CDS=97-1815


Gene families : OG0005285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0052.g031528
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g19940.1 LOC_Os09g19940 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Len_g16197 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Spa_g00448 No alias CWF19-type post-transcriptionally regulatory factor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR006767 Cwf19-like_C_dom-2 492 572
IPR006768 Cwf19-like_C_dom-1 351 468
No external refs found!